Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTFIVKKEHISQYPNPLFVNKNESIWVFEEDTEYPGWIFCKVKSSGKEGWIPKQIIQISNDGKSGTVSEDYSARELNVKPGDKLESNRELNGWVWCVTEENEAGWVPRENLEV
2V1Q Chain:A ((6-58))
-----IVQYDFMAESQDELTIKSGDKVYILD-DKKSKDWWMCQLVDSGKSGLVPAQFIE--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2V1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27103 for 332 contacts (-81.6/contact) +
2D Compatibility (PS) -5571 + (NN) -1331 + (LL) 3044
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -37611.0 ( -113.29 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_2V1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V1Q-query.scw
PDB file :
Tito_Scwrl_2V1Q.pdb
: