Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPI-WKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
2X47 Chain:A ((63-225))
-KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRT----LQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKD-KVDRLIICVFLEKDEDIYR--------
General information:
TITO was launched using:
RESULT:
Template:
2X47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111723 for 1336 contacts (-83.6/contact) +
2D Compatibility (PS) -18195 + (NN) -12583 + (LL) 1500
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -161351.0 ( -120.77 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_2X47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X47-query.scw
PDB file :
Tito_Scwrl_2X47.pdb
: