Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGD--VFLDEESIFK-HPEVKQQLFFLEDNMNHFNTYSV----QTVVKIYRQIYTTFDEAFFNELMQQFELPMKAKLM--SFSKGRKALFFIILAFSLNVRFLLLDEPLDGLD---IIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRV-IVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
4P32 Chain:A ((3-212)) | LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDS----GLGVLITDHNVRETLAVCERAYIVSQG---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138092 for 1510 contacts (-91.5/contact) +
2D Compatibility (PS) -20913 + (NN) -2635 + (LL) 8760
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -167430.0 ( -110.88 by residue)
QMean score : 0.407
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