Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKKIRIRLKAYEHRTLDTAAEKIVETATRTGATVAGPVPLPTERSLYTIIRATHKYKDSREQFEMRTHKRLVDIINPTQKTVDALMKLDLPSGVNVEIKL
1HNW Chain:J ((3-99))
----KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT
General information:
TITO was launched using:
RESULT:
Template:
1HNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28298 for 632 contacts (-44.8/contact) +
2D Compatibility (PS) -9967 + (NN) 3278 + (LL) 336
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -47651.0 ( -75.40 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1HNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNW-query.scw
PDB file :
Tito_Scwrl_1HNW.pdb
: