Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQIKITLTKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNAAIRGMVNAISHLVTVEEA
2J28 Chain:Y ((4-58))---IKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE-


General information:
TITO was launched using:
RESULT:

Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27955 for 322 contacts (-86.8/contact) +
2D Compatibility (PS) -5918 + (NN) -555 + (LL) 616
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -40862.0 ( -126.90 by residue)
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_2J28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J28-query.scw
PDB file : Tito_Scwrl_2J28.pdb: