Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITI--VSNKSRSNMRA-QIDIPLFVHTNLDQISDIVTKI--NEEYVSKHPAIVGEPTVFGPTTNANGQFVYRINIFTQNGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
| 2OAU Chain:A ((27-279)) | -------------------YAVNIVAALAIIIVGLIIARMIS----NAVNR-LMISRKIDA---TVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSI---NFVVR--VWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126939 for 1575 contacts (-80.6/contact) +
2D Compatibility (PS) -26092 + (NN) -8184 + (LL) 2936
1D Compatibility (HY) -22400 + (ID) 3550
Total energy: -184229.0 ( -116.97 by residue)
QMean score : 0.264
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