Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVAKKTVIE--PGEITLVPTGIKAHM-QPGEVLYLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITDQAVILEEGERIVQAVFAP-----FLLADDDQATGMRTGGFGSTGK
1EU5 Chain:A ((20-136))
------------------LPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDY------QGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDF---------------
General information:
TITO was launched using:
RESULT:
Template:
1EU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38691 for 688 contacts (-56.2/contact) +
2D Compatibility (PS) -11947 + (NN) -5409 + (LL) 1628
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -63819.0 ( -92.76 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_1EU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EU5-query.scw
PDB file :
Tito_Scwrl_1EU5.pdb
: