Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQET--IGELSSV---------RVD----EQIRQAMISLTERWQAKRINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQ--SHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
4I5S Chain:A ((211-432)) | -------------------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSFIKVSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFMNYILDRFDQIQSQQST----EIIRDYPDKSVWIEID---------TDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQ-LILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89018 for 1367 contacts (-65.1/contact) +
2D Compatibility (PS) -19431 + (NN) -5643 + (LL) 14084
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -117608.0 ( -86.03 by residue)
QMean score : 0.398
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