Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYITVSGLTFQYDSD--PVLEGVNYHLDSGEFVTLTGENGAAKSTLIKATLGIL-----TPKVGTVNISKENKEGKKLRIAYLPQQIASFNAGFPSSVYEFVKSGRYPRNGWFRRLTKHDE--EHIRVSLEAVGMWDNRHKKIGSLSGGQKQRAVIARMFASDPDIFVLDEPTTGMDAGTTEKFYELMHHNAHKHGKSVLMITHDPDEVKGYADRNIHL----VRNQSLPWRCFNVHTNEMEVESDAT |
4HUQ Chain:B ((6-240)) | ---ISVDHLTYQYDENQAPALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDGLLPFTQGSVTVGGITLTPETVWQVREQIGMIFQNPDNQFVG--ATVEDDVAFGLENRQ------ISRDEMVPRVQAALAQVGMTSFAQREPSSLSGGQKQRVALAGIVAIAPKILILDEATSMLDPQGRIEMLAIVRQLRQQQNLTVISITHDIDE-AASADRVLVIDDGRLVDEAVPSQIFERGTQLVEMGLDLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44474 for 1740 contacts (-25.6/contact) +
2D Compatibility (PS) -23878 + (NN) -7980 + (LL) 1076
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -92406.0 ( -53.11 by residue)
QMean score : 0.321
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