Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLESYEEIAAYIDSTKKVVFFFTADWCPDCQFIYPVMPSIEKDFSDFVFVRVNRDDYIELAQQWNIFGIPSFVVVENGQELGRLVN-KNRKTKAEITKFLAEINHK
1XFL Chain:A ((19-114))
-------EQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA-----
General information:
TITO was launched using:
RESULT:
Template:
1XFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70884 for 651 contacts (-108.9/contact) +
2D Compatibility (PS) -10556 + (NN) -4249 + (LL) 1268
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -96321.0 ( -147.96 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1XFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XFL-query.scw
PDB file :
Tito_Scwrl_1XFL.pdb
: