Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKELVKFIYSSSEGQLKALQSKANALTGEVTISDDVSDIADAW-----KKRLGLKTVQTALARKLAYASARHHYKDGKTMLEDISAGKTRRHANSYI
2E1Y Chain:A ((259-320))
----------------LERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIE
General information:
TITO was launched using:
RESULT:
Template:
2E1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129 for 297 contacts (-0.4/contact) +
2D Compatibility (PS) -6149 + (NN) -2331 + (LL) 1336
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -11823.0 ( -39.81 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2E1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E1Y-query.scw
PDB file :
Tito_Scwrl_2E1Y.pdb
: