Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNDFHHITVLLHETVDMLDIKPDGIYVDATLGGAGHSEYLLSQLGPDGHLYAFDQDQKAIDNAHIRLKKYVDTGQVTFIKDNFRNLSSNLKALGVSEINGICYDLGVSSPQLDERERGFSYKQDAPLDMRMNREQSLTAYDVVNTYSYHDLVRIFFKYGEDK-FSKQIARKIEQVRAEKPISTTTELAEIIKSSKSAKELKK-KGHPAKQIFQAIRIEVNDELGAADESIQQAMDLLAVDGRISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLQPKMELVNRKPILPSQEELEANNRAHSAKLRVARRIR |
| 1M6Y Chain:A ((9-296)) | -----RHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSD--RVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSK-----------------KLRILTEKPVRPSEEEIRENPRARSGRLRAAERI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105567 for 2469 contacts (-42.8/contact) +
2D Compatibility (PS) -31059 + (NN) -14057 + (LL) 884
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -180099.0 ( -72.94 by residue)
QMean score : 0.522
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