Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLISEEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRINGLIDCSPFGCRTGFHMIMWGKQDATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
1INN Chain:A ((7-149))
------VESFDLDHTKVKAPYVRLAGVKTTPKGDQISKYDLRFLQPNQGAIDPAAIHTLEHLLAGYMRDHLEGVVDVSPMGCRTGMYMAVIGEPDEQGVMKAFEAALKDTAG--HDQPIPGVSELECGNYRDHDLAAARQHARDVLDQGLKVQETILL--
General information:
TITO was launched using:
RESULT:
Template:
1INN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92028 for 1066 contacts (-86.3/contact) +
2D Compatibility (PS) -15252 + (NN) -7590 + (LL) 676
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -128344.0 ( -120.40 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_1INN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1INN-query.scw
PDB file :
Tito_Scwrl_1INN.pdb
: