Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFAKISQLAHYAPSQIIKNEDLSLIMDTSDDWISSRTGIKQRHISKNETTADLANKVAEQLIEKSGYSASQIDFIIVATMTPDSMMPSTAARVQAHIGASNAFAFDLSAACSGFVFALSTAEKLISSGSYQKGLVIGAETVSKVLDWTDRGTAVLFGDGAGGVLLEASKEKH-FLAESLNTDGS-RQGLQSSQVGLNSPFSDEVLDDKFLKMDGRAIFDFAIKEVSKSINHLIETSYLEKEDIDYLFLHQANRRILDKMSRKIDIARDKFPENMMDYGNTSAASIPILLSESYENGLLKLDGNQTILLSGFGGGLTWGSLIVKI
2EBD Chain:A ((4-308))----KIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAKEETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDILATRMYAEGSLEELLHADNCG-------------YIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKEG--KVKRGDLILMTAMGGGLTWGAVLLRY


General information:
TITO was launched using:
RESULT:

Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186299 for 2830 contacts (-65.8/contact) +
2D Compatibility (PS) -32077 + (NN) -11130 + (LL) 1368
1D Compatibility (HY) -30800 + (ID) 6400
Total energy: -265338.0 ( -93.76 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2EBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EBD-query.scw
PDB file : Tito_Scwrl_2EBD.pdb: