Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRKSMTTTFKIIRGYYLTGVGQEPSAYYFKIRDDFPEFETLKSGDVALTFYQNGEAITSLPALIRIDGVIEAEKQVLEFLQSEKKDHLPMLPLVALYEQFDPLQFNTVMEVFDNLKAEIKRLAKVNYVQGDLFDFMQEGEG
3AJR Chain:A ((233-258))
--------------GYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLGIEGK----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1640 for 89 contacts (-18.4/contact) +
2D Compatibility (PS) -2822 + (NN) -815 + (LL) 5312
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -2965.0 ( -33.31 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_3AJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJR-query.scw
PDB file :
Tito_Scwrl_3AJR.pdb
: