Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKWLEKSIVQSDVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPKGTILVAKSSHTRIFQDLDEKEIIVGGPYQ--------ATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKEAYVVLPTTISDEIPKEMARLSK |
2R3E Chain:A ((31-286)) | ----------VITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINSGAGLTTVITDVKNHGPLHARCPEAMVVGFEETVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL--GSTIVLKSHRTTIFH--------AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKPT--IETIAGAVYLHSLIGDDLAKTDYVVLPTKISQALPTYMKKYAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194555 for 2175 contacts (-89.5/contact) +
2D Compatibility (PS) -26598 + (NN) -8444 + (LL) 1608
1D Compatibility (HY) -21600 + (ID) 5950
Total energy: -255539.0 ( -117.49 by residue)
QMean score : 0.582
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