Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKRYDEEFKQSL--------VNLYQTGKTQSELCKDYGVSTSTLAKWIKQYSQFKLEDNSVLTAKQIQELQKHNAQLEEENLILKKASAIFMQNLK
1D4D Chain:A ((416-471))
-SAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVSGKDAQFERPDLPRELVVAPFYALEIAPAVHHTMGGLVIDT
General information:
TITO was launched using:
RESULT:
Template:
1D4D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7531 for 234 contacts (-32.2/contact) +
2D Compatibility (PS) -5038 + (NN) -367 + (LL) 208
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -18378.0 ( -78.54 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1D4D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D4D-query.scw
PDB file :
Tito_Scwrl_1D4D.pdb
: