Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKG--LQGVQFKRYKVKTDISVDELKKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVV-DALDSKSNVRYLYVEDLKNSPSNITKAYAVPFVLELPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTI-GEEFKWFLKSTIPANLGDYEKFEITDKFADGLTYKSVGKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKAD----NPKPS----NPPRKPEVHTGGKRFVKKDSTET-QTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYA-VDANAEGTAVTYK--LKETKAPEGYVIPD---KEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 4HSS Chain:A ((50-407)) | -------------------------------------------------------------------------------------DDVAGEPLNGVTFKITKLNFDLQNGDWAKFPKT-AADAKG---HETSTTKEVETSGNGTAVFDNLD----LGIYLVEETKAPDGIVTGA---PFIVSIPMVNEASDAWNYNVVAYPKNTETKTEKTVKDADQNIQDAYTYTIKADAPTWGKDKKLTA-------FRFEDELDKRLDFQKVTEVKAGDTVLGTSD-YTVNDPATDG-NKLVVTLTDE----------GLKKVKSGDKMS-----------LTFEVKR---------KEVGNTTELK-----NRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGKVLKGAEFELYQCTSAAVLGKGPLT-VDGVKKWTTGD-------------DGTFTIDGLHVTDFEDGKEAAPATKKFCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFDEVTLVSEIKNIKQGT---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41923 for 2371 contacts (17.7/contact) +
2D Compatibility (PS) -34792 + (NN) 3997 + (LL) 11332
1D Compatibility (HY) -14800 + (ID) 6150
Total energy: 1510.0 ( 0.64 by residue)
QMean score : 0.294
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