Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLHKLFITVIATLGMLGVMTFGLPTQPQNVTPIVHADVNSSVDTSQEFQNNLKNAIGNLPFQYVNGIYELNNNQTNLNADVNVKAYVQN---TIDNQQRPSTANAMLDRTIRQYQNRRDTTLPDANWKPLGWHQVAT-NDHYGHAVDKGHLIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYESLVRKAVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTLEFNVAIPNTQASYTMDYATGEITLN |
3OWV Chain:A ((49-246)) | ------------------------------------------------------------------SGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQY-----------SWTPPGWHQVKNLKGSYTHAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQNKRVRYRVTLYYASNEDLVPSASQIEAKSSDGELEFNVLVPNVQKGLQLDYRTGEVTVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31874 for 1503 contacts (-21.2/contact) +
2D Compatibility (PS) -19360 + (NN) -4066 + (LL) 4872
1D Compatibility (HY) -13200 + (ID) 4950
Total energy: -68578.0 ( -45.63 by residue)
QMean score : 0.401
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