Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYG-RIVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQSALLAYQEVYGQLSSP----YMVVGNVHDFNDGLNLSYQLVKE-VSIDGILATSDEVAAGLIKGYEESRKKCPY---IIGQECLLVGQLLK--LPTIDHKSYYLGKLAFKQALAEKISQEVLFSEFLSQDN |
| 1RZR Chain:D ((4-303)) | --TIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFV-SGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGD-YTYDSGIEAVEKLLEEDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVQLPHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176568 for 2337 contacts (-75.6/contact) +
2D Compatibility (PS) -30715 + (NN) -7493 + (LL) 584
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -234942.0 ( -100.53 by residue)
QMean score : 0.529
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