Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTYEKIYQILSKNN-NFISGETMANQLNISRTAIWKGIKTLEELGLEIESVTNKGYRLVSGDILLPEQLEQEIGIKVSLNNNSA------------STQLDAKMGIESKLKTPHLFLAPNQKKAKGRFDRPFFTSNQGGIYMSLLLQPNVPIEDIKPYTVMVASSAVKAISRLTGITPEIKWVNDIYLDNKKIAGILTEAIASVESGLVTNVIIGLGINF--YIKEFPRALTKRAGSL-FTEQPTITRNQ----LITEI---WNLFFNIPLEDHLKVYREKSLVLDKTVSFMDGQTMYSGKAIDITDKGYLVVELDDGQLKTLRSGEISLSSW |
| 3RKW Chain:A ((3-323)) | -KYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQ----LPDIWYQ--GIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGN-QSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDG--IEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYNAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131980 for 2214 contacts (-59.6/contact) +
2D Compatibility (PS) -31222 + (NN) -6681 + (LL) 928
1D Compatibility (HY) -26400 + (ID) 5300
Total energy: -200655.0 ( -90.63 by residue)
QMean score : 0.515
|
|
|