Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKTQALIEQYSKSLVEVAIEHKIVEKIQQEVAALIDIFETSELEGVLSSLAVSHDEKQHFVKTLQTSCSTYLVNFLEVIVQNEREA--------LLYPILKSVDQELIKVNGQYPIQITTAV-ALSPEQKERLFDIAKTKLALPNGQLVEHIDPSIVGGFVVNANNKVIDASVRNQLHQFKMKLK
2ZCN Chain:A ((35-134))
-------------------------------------------------ASLYYHYDNKEEIYRKSVENCFNYFIDFL---LR--DDNYSIDGLYQFLFKFIFDVDERYIKL----YVQLSSAPEALNSEIKHHLQEINTT----LHDELIKYYDPTHIALDKEDFINLILLFLETWYFRASFSQKF
General information:
TITO was launched using:
RESULT:
Template:
2ZCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19856 for 455 contacts (-43.6/contact) +
2D Compatibility (PS) -8856 + (NN) -1367 + (LL) 6484
1D Compatibility (HY) -10000 + (ID) 1250
Total energy: -34845.0 ( -76.58 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCN-query.scw
PDB file :
Tito_Scwrl_2ZCN.pdb
: