Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIFSAIDSKFWASIMENPWMILIHLMDIIIVAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSDEKLVDALVKAVAYMSPRKIGALIS-IERTQTLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKDK--KIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDALTVIVSEETGGISVALKGEFLHDLSKDSFEAILRTQLIQNQEENSKLAWYNQLLRRK |
3C1Y Chain:A ((57-159)) | ------------------------------------------------------------------------------------------------------------------------------------------GALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55096 for 706 contacts (-78.0/contact) +
2D Compatibility (PS) -10839 + (NN) -3415 + (LL) 13984
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -63766.0 ( -90.32 by residue)
QMean score : 0.460
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