Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLFLSPSCTSCRKARAWLSKHEVAFEEHNIITSPLNKEELLQILSFTENGTEDIISTRSKVFQKLAIDVDELSTSSLMELISENPSLLRRPIILDKKRMQIGFNEDEIRAFLPRDYRKQELKQATIRAEIEGKHD
3GFK Chain:A ((1-118))
MVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRKV-------------------
General information:
TITO was launched using:
RESULT:
Template:
3GFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88378 for 807 contacts (-109.5/contact) +
2D Compatibility (PS) -12537 + (NN) -6597 + (LL) 1664
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -125098.0 ( -155.02 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_3GFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFK-query.scw
PDB file :
Tito_Scwrl_3GFK.pdb
: