Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAGQYYRPSAPELRKDREVALKNMQAFNN--EDNSSKRNVILQKWFGATGKSIHMEQRFVCDYGCNIYVGENFYANFNQTFLDVCEIRIGDNCMFGPNCQLLTPLHPLDPIERNSGLEYGAPIQIGNNVWLGGGVTILPGVVLGDNVVVGAGSVVTKSFENNVVIAGNPAKIIKKLA
3SRT Chain:A ((5-186))
-TEKEKMLSGKGYYANDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE
General information:
TITO was launched using:
RESULT:
Template:
3SRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130594 for 1404 contacts (-93.0/contact) +
2D Compatibility (PS) -19845 + (NN) -7778 + (LL) 208
1D Compatibility (HY) -18000 + (ID) 5100
Total energy: -181109.0 ( -129.00 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3SRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SRT-query.scw
PDB file :
Tito_Scwrl_3SRT.pdb
: