Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQVGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
1VQZ Chain:A ((39-155)) | -----------------------------------------DEDQIFLLWINKPSIIVGRHQNTIE--EINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDENKAF----------DF-KSFSTPVINTLAQLGVKAEFT-GRNDLEIDGKKFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYMKKEYPEMTEYVFSEEELAEINRIKDTKFGTWDWNYGKSPEFNVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49885 for 676 contacts (-73.8/contact) +
2D Compatibility (PS) -12596 + (NN) -1879 + (LL) 4700
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -67760.0 ( -100.24 by residue)
QMean score : 0.351
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