Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMDWETFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR |
| 1D2Z Chain:B ((55-93)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------NFPAEIKKGFKYTAQDVFQIDEAANRLPPDQSKSQMMIDEWKTSGKLNERPTVGVLLQLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1712 for 167 contacts (-10.3/contact) +
2D Compatibility (PS) -4057 + (NN) -3081 + (LL) 13852
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 2002.0 ( 11.99 by residue)
QMean score : 0.382
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