Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPEFDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEEDTSAEERQTTFTDMMKVGLETLISE
3UAW Chain:A ((2-234))
-SVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIFTGEETTS-EERQTTFNEMIEIALDAAIQ-
General information:
TITO was launched using:
RESULT:
Template:
3UAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168416 for 2150 contacts (-78.3/contact) +
2D Compatibility (PS) -24923 + (NN) -8135 + (LL) 456
1D Compatibility (HY) -25200 + (ID) 6850
Total energy: -233068.0 ( -108.40 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_3UAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UAW-query.scw
PDB file :
Tito_Scwrl_3UAW.pdb
: