Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLALITDTSAYLPEAIENHEDVYVLDIPIIIDGKTY--IEGQNLTLDQYYDKLAASKELPKTSQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNI----QFLIEEHPNLTIAFPDTKITSAPQGNLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIVVYEKVRTEKKALKRLAEIVKEMTADGEYDIAII-HSRAQDKAEQLY-NLLAKAGLKDDLEIVSFGGVIATHLGEGAVAFGITPKN |
| 3PL5 Chain:A ((36-311)) | -TFKILTDSTADLPESWTQENDVQVLGLTVQLDGITYETVGPDRLTSRVLLEKIAAGSK-PTTSQVNVGQFESYFRQSAENGQ-EVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLAATGGEGYLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLS--------LVNIKPLLWLDASGKLVPIAKLRGRKKGMK---EMLKRATADVAHDTAVVAYANDSEAAENLKEQLLANEKIKNVVTL-PLGPVISTHVGPNTLAVFTIGKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144850 for 2170 contacts (-66.8/contact) +
2D Compatibility (PS) -28960 + (NN) -10559 + (LL) 1068
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -205201.0 ( -94.56 by residue)
QMean score : 0.610
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