Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGKFQKNLKKSVVLNRWMNVGLILLFLVGLLITSYPFISNWYYNIKANNQVTNFDNQTQKLNAKEINRRFELAKAYNRTLDPSRLSDPYTEK-EKKGIAEYAHMLEITEMIGYIDIPSIKQKLPIYAGTTSSVLEKGAGHLEGTSLPIGGKSSHTVITAHRGLPKAKLFTDLDKLKKGKIFYIHNIKEVLAYKVDQISVVKPDNFSKLLVVKGKDYATLLTCTPYSINSHRLLVRGHRIKYVPPVKEKNYLMKELQTHYKLYFLLSILVILILVALLLYLKRKFKERKRKGNQK
2W1J Chain:A ((4-198))-------------------------------------------------QQIADFDKEKATLDEADIDERMKLAQAFNDSLNNVVSGDPWSEEMKKKGRAEYARMLEIHERMGHVEIPVIDVDLPVYAGTAEEVLQQGAGHLEGTSLPIGGNSTHAVITAHTGLPTAKMFTDLTKLKVGDKFYVHNIKEVMAYQVDQVKVIEPTNFDDLLIVPGHDYVTLLTCTPYMINTHRLLVRGHRIPYVA---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2W1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83738 for 1566 contacts (-53.5/contact) +
2D Compatibility (PS) -20909 + (NN) -6812 + (LL) 9108
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -130201.0 ( -83.14 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_2W1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W1J-query.scw
PDB file : Tito_Scwrl_2W1J.pdb: