Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVHLEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
2WTS Chain:A ((4-200)) | --------------------------------------------NQQIADFDKEKATLDEADIDERMKLAQAFNDSLNNVVSGDPWSEEMKKKGRAEYARMLEIHERMGHVEIPVIDVDLPVYAGTAEEVLQQGAGHLEGTSLPIGGNSTHAVITADTGLPTAKMFTDLTKLKVGDKFYVHNIKEVMAYQVDQVKVIEPTNFDDLLIVPGHDYVTLLTCTPYMINTHRLLVRGHRIPYVAE--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65518 for 1595 contacts (-41.1/contact) +
2D Compatibility (PS) -21596 + (NN) -8395 + (LL) 8852
1D Compatibility (HY) -22000 + (ID) 6050
Total energy: -114707.0 ( -71.92 by residue)
QMean score : 0.436
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