Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPN--RKLRLEREKLAKEKG
1PQS Chain:A ((815-851))
----KIKYQDEDGDFVV---LGSDEDWNVAKEMLAENNEKFLNI----------
General information:
TITO was launched using:
RESULT:
Template:
1PQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5861 for 179 contacts (-32.7/contact) +
2D Compatibility (PS) -3700 + (NN) -1171 + (LL) 988
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -12644.0 ( -70.64 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1PQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PQS-query.scw
PDB file :
Tito_Scwrl_1PQS.pdb
: