Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIGIIVVSHSKNIAQGVVDLISE--VAKDVSITYVGGTEDGEIGTSFDQ-VQQIVEQNDKKTLLAFFDLGSAKMNLELVADFSE----KNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK |
| 3B48 Chain:A ((5-107)) | -----ILLVSHSKMITDGIKEMIEQMN--EEITIHSLGGTSDGSLGSDPMKIIDTINEADSDREFLIFADLGSAVLSSELAFDMLEEDQQKHYHLVDAPLVEGAFASAITAGSDDLTQILAEAQNAGKKGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4893 for 595 contacts (8.2/contact) +
2D Compatibility (PS) -8916 + (NN) 1658 + (LL) 472
1D Compatibility (HY) 4000 + (ID) 650
Total energy: 1457.0 ( 2.45 by residue)
QMean score : 0.145
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