Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNSVVVHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE
4WCW Chain:A ((24-114))
-------------------DDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFAALDRLWGDCPVVPVD-----
General information:
TITO was launched using:
RESULT:
Template:
4WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56389 for 595 contacts (-94.8/contact) +
2D Compatibility (PS) -10130 + (NN) -7465 + (LL) 2300
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -81734.0 ( -137.37 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_4WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCW-query.scw
PDB file :
Tito_Scwrl_4WCW.pdb
: