Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKYEAIKEKLPNADNETIAIL--MAINALSVQLSREIDIEKMEDELNKLRSKTISDIKEKVSED
3MCX Chain:A ((331-399))
------------------------------------EKVYLAKFPGKTGDDPKTNNICIIRLSEVYLNAAEAGLKKGTDIEEAQGYLNDIISRRTTDTSQQVSTE
General information:
TITO was launched using:
RESULT:
Template:
3MCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10837 for 306 contacts (35.4/contact) +
2D Compatibility (PS) -6781 + (NN) -1545 + (LL) 2204
1D Compatibility (HY) -800 + (ID) 950
Total energy: 2965.0 ( 9.69 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_3MCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MCX-query.scw
PDB file :
Tito_Scwrl_3MCX.pdb
: