Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRT-DAQVDATKENLEKEGIPVQGKDHLLFLKKGMKSKESR-RQAVQKDTNLIMLFGDNLVDFADFS-KSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAI----YQGKHLDVQKQLKERQKMLHSYD |
| 3PCT Chain:A ((15-251)) | ------------------------------------------------------LQQQVAMGLIWTQQSGEYAALAHQAFNSAKMAFDH-AK-----KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGV-NDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYGDWEGGLDKNYFKG---DSQSKLDVRAKAIHAWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38667 for 1673 contacts (-23.1/contact) +
2D Compatibility (PS) -24507 + (NN) -14015 + (LL) 4308
1D Compatibility (HY) -14000 + (ID) 4100
Total energy: -90981.0 ( -54.38 by residue)
QMean score : 0.455
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