Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALINENSQASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
2PPW Chain:A ((5-212))
-KIALINENSQASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKIIDQDFLKDTISGKYFQEYFFENCQDDEVAAYLKE---
General information:
TITO was launched using:
RESULT:
Template:
2PPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120703 for 1758 contacts (-68.7/contact) +
2D Compatibility (PS) -22932 + (NN) -15533 + (LL) 500
1D Compatibility (HY) -26800 + (ID) 7600
Total energy: -193068.0 ( -109.82 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2PPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PPW-query.scw
PDB file :
Tito_Scwrl_2PPW.pdb
: