Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHRQAVHSD-----------------------AIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVM--NECDIKNIVFSSTAATYGIPEQ---VPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALRYFNVAGDKPDGSIGEDHKPETHLLPIIL-----QVAQGVRDKIM-IFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESN------VFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED |
2CNB Chain:A ((3-382)) | MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCD--KIIFSSSAAIFGNP--TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD--DKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162933 for 2800 contacts (-58.2/contact) +
2D Compatibility (PS) -35661 + (NN) -20123 + (LL) 888
1D Compatibility (HY) -31600 + (ID) 8050
Total energy: -257479.0 ( -91.96 by residue)
QMean score : 0.545
|
|
|