Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQF-WIALENEKVVGSIALLRIDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
3PP9 Chain:A ((66-157))
------------------------------------------VYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYR--TLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNMTSDEVAIYWYLH
General information:
TITO was launched using:
RESULT:
Template:
3PP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63568 for 576 contacts (-110.4/contact) +
2D Compatibility (PS) -9601 + (NN) -4012 + (LL) 3448
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -81783.0 ( -141.98 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3PP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PP9-query.scw
PDB file :
Tito_Scwrl_3PP9.pdb
: