Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSEKEILDALSKVYSEEVIQADDYFRQAIFELASQLEKEGMNSLLATKIDSLI-----NQYVLTHQFDAPKSIFDL--SRLVKTKASHYKGTAISAIMLGSF---LSGGPK
3C9F Chain:A ((302-387))
----------------------DKEFDTAKGKLVSKLIRETRKEL---KLDTLIGYVKTNYYVDYVPIDHPKSIFNLLALKILKTLPKSKHEERITIINTGSIRYDLYKGPY
General information:
TITO was launched using:
RESULT:
Template:
3C9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9893 for 319 contacts (-31.0/contact) +
2D Compatibility (PS) -7954 + (NN) -1182 + (LL) 2468
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -22511.0 ( -70.57 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_3C9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C9F-query.scw
PDB file :
Tito_Scwrl_3C9F.pdb
: