Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQ-TYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
| 4NCI Chain:A ((1-841)) | MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILV-GLYWPLRIKDIKK-----D-------R------DTYIDLIFEKDGTKYRIT---RRFLKGYSS----------------GEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILE--SDEAREKVVREVLNLDK-----------------------IEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFELAMSLYLA---GEISLLILDEPTPYLDEERRRKLITIME----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5123 for 1965 contacts (-2.6/contact) +
2D Compatibility (PS) -28014 + (NN) -4899 + (LL) 8372
1D Compatibility (HY) -16000 + (ID) 3150
Total energy: -48814.0 ( -24.84 by residue)
QMean score : 0.238
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