Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII
1RH5 Chain:B ((36-65))
--------------------------------VAKVTALGISLLGIIGYI-----IHVPATYIKGIL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1RH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14150 for 115 contacts (-123.0/contact) +
2D Compatibility (PS) -2988 + (NN) -961 + (LL) 4516
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -15983.0 ( -138.98 by residue)
QMean score : -0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1RH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RH5-query.scw
PDB file :
Tito_Scwrl_1RH5.pdb
: