Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS
4K6C Chain:A ((167-193))
--------------------GMHGFTKSLALEIARKGVTVNTVSPGY-----------------
General information:
TITO was launched using:
RESULT:
Template:
4K6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4300 for 106 contacts (-40.6/contact) +
2D Compatibility (PS) -2794 + (NN) -663 + (LL) 2636
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -6821.0 ( -64.35 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_4K6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K6C-query.scw
PDB file :
Tito_Scwrl_4K6C.pdb
: