Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNSRTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT
2ZZN Chain:A ((60-142))
-----------------------------------------------LVDKELEEKKIIKKPSFREI-----ISKKYRKE-IDEGL---ISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKG-------
General information:
TITO was launched using:
RESULT:
Template:
2ZZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6398 for 471 contacts (-13.6/contact) +
2D Compatibility (PS) -8617 + (NN) -1693 + (LL) 4800
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -16808.0 ( -35.69 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2ZZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZZN-query.scw
PDB file :
Tito_Scwrl_2ZZN.pdb
: