Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK
2KYI Chain:A ((20-81))
--------------------MDNRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVY------------------
General information:
TITO was launched using:
RESULT:
Template:
2KYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29563 for 392 contacts (-75.4/contact) +
2D Compatibility (PS) -6218 + (NN) 2182 + (LL) 1592
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -41407.0 ( -105.63 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2KYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYI-query.scw
PDB file :
Tito_Scwrl_2KYI.pdb
: