Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR
1LYP Chain:A ((8-20))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFRNKIKEKLKKI----------


General information:
TITO was launched using:
RESULT:

Template: 1LYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2546 for 42 contacts (60.6/contact) +
2D Compatibility (PS) -1459 + (NN) -1152 + (LL) 21996
1D Compatibility (HY) 0 + (ID) 250
Total energy: 21681.0 ( 516.21 by residue)
QMean score : 0.059

(partial model without unconserved sides chains):
PDB file : Tito_1LYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LYP-query.scw
PDB file : Tito_Scwrl_1LYP.pdb: