Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGV---GVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKP-EILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
1I7F Chain:A ((5-231)) | -DQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVA---RVQGEIPENA--DLKTLVG-NGYVVITITPSEGERYQGVVGLEGDTLAADLEDYFMRSEQLPTRLFIRTGDVDGKP-----AAGGMLLQVMPAQNAQQ-DDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCT------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77513 for 1560 contacts (-49.7/contact) +
2D Compatibility (PS) -23743 + (NN) -4311 + (LL) 4960
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -114207.0 ( -73.21 by residue)
QMean score : 0.413
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