Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
4NAK Chain:A ((4-224))-SVSVILLAGG---------PKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEY--EESIDVDLSFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVK-----TLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLK-HPVYVSQGSYTNIKVTTPDDLLLAERIL---------


General information:
TITO was launched using:
RESULT:

Template: 4NAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -124954 for 1614 contacts (-77.4/contact) +
2D Compatibility (PS) -22465 + (NN) -9873 + (LL) 1272
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -179070.0 ( -110.95 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4NAK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NAK-query.scw
PDB file : Tito_Scwrl_4NAK.pdb: