Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3F0E Chain:A ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3F0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121596 for 1328 contacts (-91.6/contact) +
2D Compatibility (PS) -16966 + (NN) -11123 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -168849.0 ( -127.15 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3F0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0E-query.scw
PDB file :
Tito_Scwrl_3F0E.pdb
: