Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPNDLHKKSSRIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT
2GSL Chain:A ((5-111))
----DFSKDIRDYSGLELAFLGDAIWELEIRKYYLQFGYNIPT-LNKYVKAKVNAKYQSLIYKKIIND--LDEEFKVIGKRAKN--IKTFPRSCTVMEYKEATALEAIIGAMYL-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GSL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24094 for 730 contacts (-33.0/contact) +
2D Compatibility (PS) -11263 + (NN) -6347 + (LL) 2968
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -48286.0 ( -66.15 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2GSL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GSL-query.scw
PDB file :
Tito_Scwrl_2GSL.pdb
: